Transcript: ENST00000518211.1 RB1CC1-005

Description

RB1-inducible coiled-coil 1 [Source:HGNC Symbol;Acc:15574]

Gene Synonyms

CC1, Cc1, DRAGOU14, FIP200, KIAA0203, RBICC

Location

Chromosome 8: 53,596,510-53,627,004 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 1 domain and feature, is associated with 14657 variant alleles and maps to 167 oligo probes.

Gene

This transcript is a product of gene ENSG00000023287.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000025008.5	RB1CC1-001	6635	1594aa	ENSP00000025008.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34892	B4DGF9 E5RH63 Q8TDY2	NM_014781.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000435644.2	RB1CC1-002	6614	1591aa	ENSP00000396067.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47856	E5RH63 Q8TDY2	NM_001083617.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000539297.1	RB1CC1-201	4776	1591aa	ENSP00000445960.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47856	E5RH63 Q8TDY2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000518710.1	RB1CC1-003	711	52aa	ENSP00000429879.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RH63	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000517963.1	RB1CC1-004	551	72aa	ENSP00000429918.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RH44	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000518468.1	RB1CC1-006	507	15aa	ENSP00000429611.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000519912.1	RB1CC1-011	470	127aa	ENSP00000430809.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000518211.1	RB1CC1-005	891	42aa	ENSP00000429115.1	Nonsense mediated decay		E5RJC1	-	-
ENST00000523594.1	RB1CC1-007	560	109aa	ENSP00000430792.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000521611.1	RB1CC1-009	528	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000522957.1	RB1CC1-010	1297	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 2, Transcript length: 891 bps, Translation length: 42 residues

Version

ENST00000518211.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000378082 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000518211.1 RB1CC1-005

Summary