Transcript: ENST00000024061.3 SLC45A4-001

Description

solute carrier family 45, member 4 [Source:HGNC Symbol;Acc:29196]

Gene Synonyms

KIAA1126

Location

Chromosome 8: 142,220,700-142,238,673 reverse strand.

About this transcript

This transcript has 8 exons, is annotated with 23 domains and features, is associated with 9573 variant alleles and maps to 352 oligo probes.

Gene

This transcript is a product of gene ENSG00000022567.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000024061.3	SLC45A4-001	3546	798aa	ENSP00000024061.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34948	E5RJM7 Q5BKX6	NM_001080431.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000519067.1	SLC45A4-002	7483	717aa	ENSP00000429059.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS69550	E5RJM7 Q5BKX6	NM_001286648.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000517878.1	SLC45A4-003	3470	808aa	ENSP00000428137.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RJM7 E7EV90 J3KQI8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000433583.2	SLC45A4-201	3367	750aa	ENSP00000400799.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RJM7 J3KQI8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000520137.1	SLC45A4-005	835	95aa	ENSP00000429033.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RJM7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000519986.1	SLC45A4-004	542	102aa	ENSP00000429974.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RGN5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000521804.1	SLC45A4-006	726	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 3,546 bps, Translation length: 798 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q5BKX6

CCDS

This transcript is a member of the Human CCDS set: CCDS34948

Version

ENST00000024061.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000378571 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000024061.3 SLC45A4-001

Summary