Transcript: ENST00000389902.3 RNF216-003

Description

ring finger protein 216 [Source:HGNC Symbol;Acc:21698]

Gene Synonyms

CAHH, TRIAD3, U7I1, UBCE7IP1, ZIN

Location

Chromosome 7: 5,662,238-5,821,370 reverse strand.

About this transcript

This transcript has 17 exons, is annotated with 11 domains and features, is associated with 89754 variant alleles and maps to 706 oligo probes.

Gene

This transcript is a product of gene ENSG00000011275.14 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000425013.2	RNF216-001	5639	866aa	ENSP00000404602.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34595	C9JIV3 Q9NWF9	NM_207116.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000389902.3	RNF216-003	3293	923aa	ENSP00000374552.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34594	C9JIV3 Q9NWF9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000416985.1	RNF216-005	570	19aa	ENSP00000396829.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JIV3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000389900.4	RNF216-004	3104	326aa	ENSP00000374550.4	Nonsense mediated decay		C9JIV3 F8W6D1	-	-
ENST00000411812.1	RNF216-006	563	49aa	ENSP00000409837.1	Nonsense mediated decay		C9JIV3 F8WDI8	-	-
ENST00000469375.1	RNF216-010	922	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000476345.1	RNF216-007	546	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000484458.2	RNF216-009	492	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000479541.1	RNF216-008	580	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 17, Coding exons: 16, Transcript length: 3,293 bps, Translation length: 923 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9NWF9

CCDS

This transcript is a member of the Human CCDS set: CCDS34594

Version

ENST00000389902.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000340376 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000389902.3 RNF216-003

Summary