Transcript: ENST00000461861.1 PHF7-011

Description

PHD finger protein 7 [Source:HGNC Symbol;Acc:18458]

Gene Synonyms

HSPC045, HSPC226, NYD-SP6

Location

Chromosome 3: 52,448,539-52,457,656 forward strand.

About this transcript

This transcript has 8 exons, is annotated with 7 domains and features, is associated with 3973 variant alleles and maps to 365 oligo probes.

Gene

This transcript is a product of gene ENSG00000010318.15 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000327906.3	PHF7-001	2130	381aa	ENSP00000333024.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2854	C9J4W0 Q9BWX1	NM_016483.5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000347025.2	PHF7-004	1472	342aa	ENSP00000246282.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2855	C9J4W0 Q9BWX1	NM_001278221.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000461861.1	PHF7-011	1303	326aa	ENSP00000417712.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000465863.1	PHF7-010	494	63aa	ENSP00000420521.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000482327.1	PHF7-012	576	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000472337.1	PHF7-008	387	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000498509.2	PHF7-003	1727	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000473145.1	PHF7-007	962	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000459935.1	PHF7-009	790	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 1,303 bps, Translation length: 326 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000461861.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000351164 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000461861.1 PHF7-011

Summary