Transcript: ENST00000378358.4 PABPN1L-201

Description

poly(A) binding protein, nuclear 1-like (cytoplasmic) [Source:HGNC Symbol;Acc:37237]

Gene Synonyms

EPABP2, PABPNL1, ePABP2

Location

Chromosome 16: 88,928,034-88,933,014 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 9 domains and features, is associated with 3799 variant alleles and maps to 179 oligo probes.

Gene

This transcript is a product of gene ENSG00000205022.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000419291.2	PABPN1L-001	1272	278aa	ENSP00000408598.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45547	A6NDY0	NM_001080487.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000427766.1	PABPN1L-202	1162	297aa	ENSP00000390913.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JEK9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000411789.2	PABPN1L-003	873	255aa	ENSP00000405259.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A6NDY0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000378358.4	PABPN1L-201	870	289aa	ENSP00000367609.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A6NDY0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000547152.1	PABPN1L-002	854	266aa	ENSP00000449247.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A6NDY0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 870 bps, Translation length: 289 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: A6NDY0

Version

ENST00000378358.4

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000378358.4 PABPN1L-201

Summary