Transcript: ENST00000475127.1 RCSD1-003

Description

RCSD domain containing 1 [Source:HGNC Symbol;Acc:28310]

Gene Synonyms

CAPZIP, MGC21854, MK2S4

Location

Chromosome 1: 167,599,486-167,611,243 forward strand.

About this transcript

This transcript has 3 exons, is associated with 5215 variant alleles and maps to 163 oligo probes.

Gene

This transcript is a product of gene ENSG00000198771.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000367854.3	RCSD1-001	3135	416aa	ENSP00000356828.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1263	Q6JBY9	NM_052862.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000537350.1	RCSD1-201	1275	386aa	ENSP00000439409.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7ZKW8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000361496.3	RCSD1-005	822	197aa	ENSP00000355291.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F6T4W9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000472038.1	RCSD1-002	1719	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000475127.1	RCSD1-003	939	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000461790.1	RCSD1-004	932	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 939 bps,

Version

ENST00000475127.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000085453 (version 1)

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Transcript: ENST00000475127.1 RCSD1-003

Summary