Transcript: ENST00000460763.1 FAM177B-004

Description

family with sequence similarity 177, member B [Source:HGNC Symbol;Acc:34395]

Gene Synonyms

FLJ43505, RP11-452F19.2

Location

Chromosome 1: 222,913,026-222,920,789 forward strand.

About this transcript

This transcript has 2 exons, is associated with 3462 variant alleles and maps to 114 oligo probes.

Gene

This transcript is a product of gene ENSG00000197520.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000445590.2	FAM177B-201	1345	158aa	ENSP00000414451.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1535	A6PVY1 A6PVY2 A6PVY3	NM_207468.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000360827.2	FAM177B-003	764	158aa	ENSP00000354070.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1535	A6PVY1 A6PVY2 A6PVY3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000456298.1	FAM177B-005	545	99aa	ENSP00000400233.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A6PVY1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000434700.1	FAM177B-002	466	100aa	ENSP00000391615.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A6PVY1 A6PVY2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000391880.2	FAM177B-001	1994	120aa	ENSP00000375752.2	Nonsense mediated decay		A6PVY3	-	-
ENST00000460763.1	FAM177B-004	582	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 582 bps,

Version

ENST00000460763.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000316736 (version 1)

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Transcript: ENST00000460763.1 FAM177B-004

Summary