Transcript: ENST00000567745.1 THSD4-005

Description

thrombospondin, type I, domain containing 4 [Source:HGNC Symbol;Acc:25835]

Gene Synonyms

ADAMTSL-6, ADAMTSL6, FLJ13710, FVSY9334, PRO34005

Location

Chromosome 15: 71,839,567-72,030,556 forward strand.

About this transcript

This transcript has 5 exons, is associated with 87310 variant alleles and maps to 177 oligo probes.

Gene

This transcript is a product of gene ENSG00000187720.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000355327.3	THSD4-002	9200	1018aa	ENSP00000347484.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10238	Q6ZMP0	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000261862.6	THSD4-201	9145	1018aa	ENSP00000261862.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10238	Q6ZMP0	NM_024817.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000357769.4	THSD4-001	3403	658aa	ENSP00000350413.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS66817	B4DR13	NM_001286429.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000567838.1	THSD4-006	2645	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000567776.1	THSD4-004	5594	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000567745.1	THSD4-005	1218	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 1,218 bps,

Version

ENST00000567745.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000420805 (version 1)

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Transcript: ENST00000567745.1 THSD4-005

Summary