Transcript: ENST00000419791.1 NT5DC1-003

Description

5'-nucleotidase domain containing 1 [Source:HGNC Symbol;Acc:21556]

Gene Synonyms

C6orf200, LP2642, MGC24302, NT5C2L1, dJ486I3.1

Location

About this transcript

This transcript has 7 exons, is annotated with 4 domains and features, is associated with 19711 variant alleles and maps to 158 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000319550.4	NT5DC1-002	6923	455aa	ENSP00000326858.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5104	Q5TFE4	NM_152729.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000419791.1	NT5DC1-003	667	195aa	ENSP00000393578.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5QPD0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000417846.1	NT5DC1-004	417	111aa	ENSP00000404419.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000460749.1	NT5DC1-001	907	141aa	ENSP00000433238.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 667 bps, Translation length: 195 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000419791.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000041932 (version 1)