Transcript: ENST00000495639.1 SPATA3-009

Description

spermatogenesis associated 3 [Source:HGNC Symbol;Acc:17884]

Gene Synonyms

TSARG1

Location

Chromosome 2: 231,867,486-231,889,770 forward strand.

About this transcript

This transcript has 4 exons, is associated with 11344 variant alleles and maps to 164 oligo probes.

Gene

This transcript is a product of gene ENSG00000173699.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000452881.1	SPATA3-001	1618	192aa	ENSP00000388895.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2481	Q8NHX4	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000424440.1	SPATA3-002	1011	192aa	ENSP00000399514.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2481	Q8NHX4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000433428.2	SPATA3-003	856	192aa	ENSP00000403804.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2481	Q8NHX4	NM_139073.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000455816.1	SPATA3-008	766	192aa	ENSP00000388741.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2481	Q8NHX4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000423134.1	SPATA3-007	433	87aa	ENSP00000411374.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000495639.1	SPATA3-009	423	6aa	ENSP00000436378.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000440792.1	SPATA3-006	406	104aa	ENSP00000404510.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7C283	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000454918.1	SPATA3-004	332	37aa	ENSP00000395644.1	Nonsense mediated decay		F8WDD9	-	-
ENST00000409956.1	SPATA3-005	436	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 1, Transcript length: 423 bps, Translation length: 6 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000495639.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000333735 (version 2)

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Transcript: ENST00000495639.1 SPATA3-009

Summary