Transcript: ENST00000427505.1 ZNF440-002

Description

zinc finger protein 440 [Source:HGNC Symbol;Acc:20874]

Gene Synonyms

FLJ37933

Location

Chromosome 19: 11,925,159-11,942,798 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 28 domains and features, is associated with 8233 variant alleles and maps to 187 oligo probes.

Gene

This transcript is a product of gene ENSG00000171295.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000304060.5	ZNF440-001	4189	595aa	ENSP00000305373.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42503	C9JG89 K7EJ55 Q8IYI8	NM_152357.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000427505.1	ZNF440-002	920	272aa	ENSP00000393489.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J3D9 C9JG89 C9JV94 K7EJ55	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000414255.1	ZNF440-003	796	169aa	ENSP00000411974.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J3D9 K7EJ55	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000457526.1	ZNF440-004	559	53aa	ENSP00000404425.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JG89	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000588954.1	ZNF440-005	556	49aa	ENSP00000465030.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EJ55	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000587795.1	ZNF440-006	1659	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 920 bps, Translation length: 272 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000427505.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000344509 (version 1)

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Transcript: ENST00000427505.1 ZNF440-002

Summary