Transcript: ENST00000304060.5 ZNF440-001

Description

zinc finger protein 440 [Source:HGNC Symbol;Acc:20874]

Gene Synonyms

FLJ37933

Location

Chromosome 19: 11,925,099-11,946,016 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 72 domains and features, is associated with 10042 variant alleles and maps to 491 oligo probes.

Gene

This transcript is a product of gene ENSG00000171295.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000304060.5	ZNF440-001	4189	595aa	ENSP00000305373.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42503	C9JG89 K7EJ55 Q8IYI8	NM_152357.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000427505.1	ZNF440-002	920	272aa	ENSP00000393489.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J3D9 C9JG89 C9JV94 K7EJ55	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000414255.1	ZNF440-003	796	169aa	ENSP00000411974.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J3D9 K7EJ55	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000457526.1	ZNF440-004	559	53aa	ENSP00000404425.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JG89	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000588954.1	ZNF440-005	556	49aa	ENSP00000465030.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EJ55	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000587795.1	ZNF440-006	1659	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 4,189 bps, Translation length: 595 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8IYI8

CCDS

This transcript is a member of the Human CCDS set: CCDS42503

Version

ENST00000304060.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000344508 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000304060.5 ZNF440-001

Summary