Transcript: ENST00000438435.2 MR1-005

Description

major histocompatibility complex, class I-related [Source:HGNC Symbol;Acc:4975]

Gene Synonyms

HLALS

Location

Chromosome 1: 181,003,146-181,024,420 forward strand.

About this transcript

This transcript has 6 exons, is associated with 9475 variant alleles and maps to 464 oligo probes.

Gene

This transcript is a product of gene ENSG00000153029.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000367580.5	MR1-001	7704	341aa	ENSP00000356552.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1342	Q95460	NM_001531.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000282990.6	MR1-002	2043	249aa	ENSP00000282990.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53440	Q95460	NM_001195000.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000367579.3	MR1-003	1154	296aa	ENSP00000356551.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53442	Q95460	NM_001194999.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000434571.2	MR1-201	1046	214aa	ENSP00000388504.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53441	Q95460	NM_001195035.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000438435.2	MR1-005	883	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000367578.1	MR1-004	1577	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000486453.1	MR1-006	749	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 0, Transcript length: 883 bps,

Version

ENST00000438435.2

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000085138 (version 1)

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000438435.2 MR1-005

Summary