Transcript: ENST00000440097.1 LIMD1-002

Description

LIM domains containing 1 [Source:HGNC Symbol;Acc:6612]

Location

About this transcript

This transcript has 6 exons, is annotated with 19 domains and features, is associated with 33553 variant alleles and maps to 225 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000273317.4	LIMD1-001	11331	676aa	ENSP00000273317.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2729	Q9UGP4	NM_014240.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000440097.1	LIMD1-002	2773	620aa	ENSP00000394537.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JRJ5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000465039.1	LIMD1-004	676	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000474665.1	LIMD1-003	513	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 2,773 bps, Translation length: 620 residues

Version

ENST00000440097.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000345079 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.