Transcript: ENST00000492728.1 CHD1L-004

Description

chromodomain helicase DNA binding protein 1-like [Source:HGNC Symbol;Acc:1916]

Gene Synonyms

ALC1, CHDL

Location

Chromosome 1: 146,714,396-146,731,700 forward strand.

About this transcript

This transcript has 6 exons, is associated with 7500 variant alleles and maps to 173 oligo probes.

Gene

This transcript is a product of gene ENSG00000131778.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000369258.4	CHD1L-001	2967	897aa	ENSP00000358262.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS927	B5MDZ7 Q86WJ1	NM_024568.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000431239.1	CHD1L-203	2726	803aa	ENSP00000389031.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q86WJ1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000361293.5	CHD1L-201	2413	616aa	ENSP00000355100.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58022	B5MDZ7	NM_001256337.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000369259.3	CHD1L-202	2396	693aa	ENSP00000358263.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58021	B5MDZ7 Q86WJ1	NM_001256338.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000467213.1	CHD1L-002	2782	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000488864.1	CHD1L-003	947	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000492728.1	CHD1L-004	662	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000469625.1	CHD1L-006	414	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000485113.1	CHD1L-005	377	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 0, Transcript length: 662 bps,

Version

ENST00000492728.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000100079 (version 1)

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Transcript: ENST00000492728.1 CHD1L-004

Summary