Transcript: ENST00000586992.1 PPP1R12C-004

Description

protein phosphatase 1, regulatory subunit 12C [Source:HGNC Symbol;Acc:14947]

Gene Synonyms

DKFZP434D0412, LENG3, MBS85, p84, p85

Location

Chromosome 19: 55,622,744-55,626,884 reverse strand.

About this transcript

This transcript has 1 exon, is associated with 2093 variant alleles and maps to 153 oligo probes.

Gene

This transcript is a product of gene ENSG00000125503.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000263433.3	PPP1R12C-001	2924	782aa	ENSP00000263433.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12916	Q9BZL4	NM_017607.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000376393.2	PPP1R12C-201	2733	719aa	ENSP00000365573.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B5MEC7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000435544.2	PPP1R12C-002	2363	707aa	ENSP00000387833.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DME2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000592993.1	PPP1R12C-006	2269	737aa	ENSP00000465957.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000591938.1	PPP1R12C-003	1262	234aa	ENSP00000468148.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000586992.1	PPP1R12C-004	4141	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000590268.1	PPP1R12C-009	830	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000592754.1	PPP1R12C-005	827	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000586197.1	PPP1R12C-007	472	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000588277.1	PPP1R12C-008	419	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 1, Coding exons: 0, Transcript length: 4,141 bps,

Version

ENST00000586992.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000451821 (version 1)

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Transcript: ENST00000586992.1 PPP1R12C-004

Summary