Transcript: ENST00000352251.3 PROSER1-003

Description

proline and serine rich 1 [Source:HGNC Symbol;Acc:20291]

Gene Synonyms

C13orf23, FLJ12661, KIAA2032, bA50D16.2

Location

Chromosome 13: 39,584,003-39,612,213 reverse strand.

About this transcript

This transcript has 13 exons, is annotated with 14 domains and features, is associated with 13107 variant alleles and maps to 642 oligo probes.

Gene

This transcript is a product of gene ENSG00000120685.15 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000352251.3	PROSER1-003	5168	944aa	ENSP00000332034.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9368	Q86XN7	NM_025138.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000350125.3	PROSER1-201	5141	922aa	ENSP00000339123.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A6NJ97 Q5JS36	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000418503.1	PROSER1-001	898	101aa	ENSP00000413879.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5JS36	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000484434.3	PROSER1-004	2150	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000468017.1	PROSER1-007	437	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000602534.1	PROSER1-008	576	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000602899.1	PROSER1-010	574	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000602512.1	PROSER1-009	569	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000492646.1	PROSER1-002	505	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000436678.1	PROSER1-006	501	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000496138.2	PROSER1-005	418	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 5,168 bps, Translation length: 944 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q86XN7

CCDS

This transcript is a member of the Human CCDS set: CCDS9368

Version

ENST00000352251.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000044607 (version 5)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000352251.3 PROSER1-003

Summary