Transcript: ENST00000472392.1 NIT2-006

Description

nitrilase family, member 2 [Source:HGNC Symbol;Acc:29878]

Gene Synonyms

HEL-S-8a

Location

Chromosome 3: 100,057,938-100,064,667 forward strand.

About this transcript

This transcript has 4 exons, is associated with 2832 variant alleles and maps to 161 oligo probes.

Gene

This transcript is a product of gene ENSG00000114021.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000394140.4	NIT2-001	2520	276aa	ENSP00000377696.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33806	Q9NQR4	NM_020202.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000497785.1	NIT2-002	795	265aa	ENSP00000419189.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000460317.1	NIT2-003	648	44aa	ENSP00000419239.1	Nonsense mediated decay		F8WF58	-	-
ENST00000480073.1	NIT2-005	625	92aa	ENSP00000419157.1	Nonsense mediated decay		F8WF70	-	-
ENST00000478856.1	NIT2-007	1655	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000465368.1	NIT2-004	1469	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000472392.1	NIT2-006	580	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 580 bps,

Version

ENST00000472392.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000353147 (version 1)

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Transcript: ENST00000472392.1 NIT2-006

Summary