Transcript: ENST00000585534.1 CNTNAP1-003

Description

contactin associated protein 1 [Source:HGNC Symbol;Acc:8011]

Gene Synonyms

CASPR, CNTNAP, Caspr, NRXN4, P190, p190

Location

About this transcript

This transcript has 2 exons, is associated with 543 variant alleles and maps to 94 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000264638.4	CNTNAP1-001	5276	1384aa	ENSP00000264638.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11436	P78357	NM_003632.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000591662.1	CNTNAP1-002	4499	740aa	ENSP00000466571.1	Nonsense mediated decay		K7EMM9	-	-
ENST00000586801.1	CNTNAP1-004	838	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000585534.1	CNTNAP1-003	613	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 613 bps,

Version

ENST00000585534.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000452345 (version 1)