Transcript: ENST00000413927.1 SPAM1-003

Description

sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding) [Source:HGNC Symbol;Acc:11217]

Gene Synonyms

HEL-S-96n, HYA1, HYAL1, HYAL3, HYAL5, PH-20, PH20, SPAG15

Location

Chromosome 7: 123,565,291-123,593,865 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 7 domains and features, is associated with 11309 variant alleles and maps to 159 oligo probes.

Gene

This transcript is a product of gene ENSG00000106304.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000340011.5	SPAM1-002	2349	511aa	ENSP00000345849.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5790	C9J2X5 P38567	NM_003117.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000439500.1	SPAM1-001	2220	509aa	ENSP00000402123.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5791	C9J2X5 P38567 Q5D1J4	NM_001174046.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000460182.1	SPAM1-005	2154	509aa	ENSP00000417934.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5791	C9J2X5 P38567 Q5D1J4	NM_001174044.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000223028.7	SPAM1-201	2007	509aa	ENSP00000223028.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5791	C9J2X5 P38567 Q5D1J4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000402183.2	SPAM1-202	1969	509aa	ENSP00000386028.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5791	C9J2X5 P38567 Q5D1J4	NM_153189.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000413927.1	SPAM1-003	760	80aa	ENSP00000391491.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J2X5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 1, Transcript length: 760 bps, Translation length: 80 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000413927.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000348311 (version 1)

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Recent locations

Transcript: ENST00000413927.1 SPAM1-003

Summary