EMBL-EBI User Survey 2024

Do data resources managed by EMBL-EBI and our collaborators make a difference to your work?

Please take 10 minutes to fill in our annual user survey, and help us make the case for why sustaining open data resources is critical for life sciences research.

Survey link: https://www.surveymonkey.com/r/HJKYKTT?channel=[webpage]

Human (GRCh37.p13)
Description

sialic acid binding Ig-like lectin 5 [Source:HGNC Symbol;Acc:10874]

Gene Synonyms

CD170, CD33L2, OB-BP2, OBBP2, SIGLEC-5

Location
About this transcript

This transcript has 9 exons, is annotated with 26 domains and features, is associated with 15214 variant alleles and maps to 403 oligo probes.

Gene
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeqFlags
ENST00000570106.2SIGLEC5-2022359551aaENSP00000455510.2
 
Protein coding
CCDS33088O15389 NM_003830.3Ensembl CanonicalGENCODE basic
ENST00000222107.4SIGLEC5-2012498551aaENSP00000222107.4
 
Protein coding
O15389 -GENCODE basic
ENST00000534261.2SIGLEC5-0012356551aaENSP00000473238.1
 
Protein coding
CCDS33088O15389 -GENCODE basic
Statistics

Exons: 9, Coding exons: 9, Transcript length: 2,498 bps, Translation length: 551 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O15389

Version

ENST00000222107.4

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Stop codons

This transcript has a variant, rs8108078, that causes a stop codon to be gained in at least 10% of HapMap or 1000 Genome population(s) CSHL-HAPMAP:HapMap-YRI, ESP6500:African_American, CSHL-HAPMAP:HAPMAP-LWK.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.