Transcript: ENST00000552192.1 SLC6A15-003

Description

solute carrier family 6 (neutral amino acid transporter), member 15 [Source:HGNC Symbol;Acc:13621]

Gene Synonyms

B0AT2, FLJ10316, NTT73, SBAT1, V7-3, hv7-3

Location

Chromosome 12: 85,255,373-85,306,580 reverse strand.

About this transcript

This transcript has 11 exons, is annotated with 26 domains and features, is associated with 23881 variant alleles and maps to 325 oligo probes.

Gene

This transcript is a product of gene ENSG00000072041.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000266682.5	SLC6A15-001	4044	730aa	ENSP00000266682.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9026	F8VSG1 F8VX16 Q68CX0 Q9H2J7	NM_182767.5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000450363.3	SLC6A15-002	4229	289aa	ENSP00000390706.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9027	F8VSG1 Q9H2J7	NM_018057.6	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000309283.7	SLC6A15-004	3108	316aa	ENSP00000311645.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8WJN6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000552192.1	SLC6A15-003	2221	623aa	ENSP00000450145.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53816	F8VX16 Q9H2J7	NM_001146335.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000551612.1	SLC6A15-007	582	71aa	ENSP00000449263.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VX16	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000549540.1	SLC6A15-010	563	96aa	ENSP00000448308.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VSG1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000551010.1	SLC6A15-011	546	19aa	ENSP00000475035.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000551388.1	SLC6A15-006	592	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000551818.1	SLC6A15-008	587	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000547240.1	SLC6A15-005	545	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000548267.1	SLC6A15-009	1367	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 10, Transcript length: 2,221 bps, Translation length: 623 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9H2J7

CCDS

This transcript is a member of the Human CCDS set: CCDS53816

Version

ENST00000552192.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000405679 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000552192.1 SLC6A15-003

Summary