Transcript: ENST00000524894.1 DDX20-004

Description

DEAD (Asp-Glu-Ala-Asp) box polypeptide 20 [Source:HGNC Symbol;Acc:2743]

Gene Synonyms

DP103, GEMIN3

Location

Chromosome 1: 112,303,704-112,305,110 forward strand.

About this transcript

This transcript has 3 exons, is associated with 601 variant alleles and maps to 170 oligo probes.

Gene

This transcript is a product of gene ENSG00000064703.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000369702.4	DDX20-001	4212	824aa	ENSP00000358716.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS842	Q9UHI6	NM_007204.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000475700.1	DDX20-002	4332	432aa	ENSP00000435660.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PJ60	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000536167.1	DDX20-201	1263	138aa	ENSP00000439026.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DWV7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000533164.1	DDX20-003	1499	138aa	ENSP00000434085.1	Nonsense mediated decay		B4DWV7	-	-
ENST00000534200.1	DDX20-005	562	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000524894.1	DDX20-004	337	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 337 bps,

Version

ENST00000524894.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000388434 (version 1)

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Transcript: ENST00000524894.1 DDX20-004

Summary