Description
collagen, type XI, alpha 1 [Source:HGNC Symbol;Acc:2186]
Gene Synonyms
CO11A1, COLL6, STL2
Location
Chromosome 1: 103,343,273-103,345,574 reverse strand.
About this transcript
This transcript has 2 exons, is associated with 1311 variant alleles and maps to 391 oligo probes.
Gene
This transcript is a product of gene ENSG00000060718.14 Show transcript tableHide transcript table
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000370096.3 | COL11A1-001 | 7286 | 1806aa | ENSP00000359114.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS778 | B4DQZ0 P12107 Q4FAC4 | NM_001854.3 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000358392.2 | COL11A1-202 | 7327 | 1818aa | ENSP00000351163.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4DQZ0 C9JMN2 P12107 | NM_080629.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000353414.4 | COL11A1-201 | 7174 | 1767aa | ENSP00000302551.6 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS53348 | B4DQZ0 P12107 | NM_001190709.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000512756.1 | COL11A1-008 | 5442 | 1690aa | ENSP00000426533.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS780 | B4DQZ0 P12107 Q4FAC4 | NM_080630.3 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000427239.1 | COL11A1-002 | 1709 | 569aa | ENSP00000408640.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JMN2 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000447608.1 | COL11A1-003 | 776 | 200aa | ENSP00000410177.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H7C381 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000461720.1 | COL11A1-004 | 678 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000475980.1 | COL11A1-005 | 377 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000470170.1 | COL11A1-007 | 785 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000465209.1 | COL11A1-006 | 297 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |