Transcript: ENST00000518211.1 RB1CC1-005

Description

RB1-inducible coiled-coil 1 [Source:HGNC Symbol;Acc:15574]

Gene Synonyms

CC1, Cc1, DRAGOU14, FIP200, KIAA0203, RBICC

Location

Chromosome 8: 53,596,510-53,627,004 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 1 domain and feature, is associated with 14657 variant alleles and maps to 167 oligo probes.

Gene

This transcript is a product of gene ENSG00000023287.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000025008.5	RB1CC1-001	6635	1594aa	ENSP00000025008.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34892	B4DGF9 E5RH63 Q8TDY2	NM_014781.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000435644.2	RB1CC1-002	6614	1591aa	ENSP00000396067.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47856	E5RH63 Q8TDY2	NM_001083617.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000539297.1	RB1CC1-201	4776	1591aa	ENSP00000445960.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47856	E5RH63 Q8TDY2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000518710.1	RB1CC1-003	711	52aa	ENSP00000429879.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RH63	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000517963.1	RB1CC1-004	551	72aa	ENSP00000429918.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RH44	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000518468.1	RB1CC1-006	507	15aa	ENSP00000429611.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000519912.1	RB1CC1-011	470	127aa	ENSP00000430809.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000518211.1	RB1CC1-005	891	42aa	ENSP00000429115.1	Nonsense mediated decay		E5RJC1	-	-
ENST00000523594.1	RB1CC1-007	560	109aa	ENSP00000430792.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000521611.1	RB1CC1-009	528	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000522957.1	RB1CC1-010	1297	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 2, Transcript length: 891 bps, Translation length: 42 residues

Version

ENST00000518211.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000378082 (version 1)

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Transcript: ENST00000518211.1 RB1CC1-005

Summary