Gene: GGA2 ENSG00000103365

Description

golgi-associated, gamma adaptin ear containing, ARF binding protein 2 [Source:HGNC Symbol;Acc:16064]

Gene Synonyms

KIAA1080, VEAR

Location

Chromosome 16: 23,474,863-23,533,316 reverse strand.

GRCh37:CM000678.1

About this gene

This gene has 17 transcripts (splice variants) and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000309859.4	GGA2-001	5973	613aa	ENSP00000311962.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10611	H3BMN6 Q9UJY4	NM_015044.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000567468.1	GGA2-002	1713	223aa	ENSP00000454455.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BMM6 H3BMN6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000569300.1	GGA2-012	572	125aa	ENSP00000455331.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BPI3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000562944.1	GGA2-006	388	117aa	ENSP00000459560.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BMN6 I3L2C4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000562117.1	GGA2-009	387	129aa	ENSP00000459414.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000569189.2	GGA2-008	586	59aa	ENSP00000460975.1	Nonsense mediated decay		H3BMN6	-	-
ENST00000570111.1	GGA2-011	563	59aa	ENSP00000454469.1	Nonsense mediated decay		H3BMN6	-	-
ENST00000563494.1	GGA2-010	553	59aa	ENSP00000456247.1	Nonsense mediated decay		H3BMN6	-	-
ENST00000563047.1	GGA2-018	366	49aa	ENSP00000455293.1	Nonsense mediated decay		H3BPF4	-	-
ENST00000569182.1	GGA2-013	587	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000566685.1	GGA2-016	571	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000567339.1	GGA2-015	293	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000568922.1	GGA2-014	1807	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000568799.1	GGA2-007	1403	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000566547.1	GGA2-004	603	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000567201.1	GGA2-017	576	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000566651.1	GGA2-005	332	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Retirement notice

Human only - retirement of this view

As of Ensembl release 93 this view will no longer be available for human, because we feel that the density of known human genetic variation is too great for the display to be informative in its current form.

Other species will not be affected, as they have less variation data.

For more information about the decision and on how to find variation data for a gene, please see our blog post.

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Gene: GGA2 ENSG00000103365

Variant image

Retirement notice

Human only - retirement of this view