Description
mutS homolog 5 [Source:HGNC Symbol;Acc:7328]
Gene Synonyms
G7, MUTSH5, NG23
Location
Chromosome 6: 31,707,725-31,732,622 forward strand.
GRCh37:CM000668.1
View alleles of this gene on alternative sequences
About this gene
This gene has 22 transcripts (splice variants), 1 gene allele, 1 paralogue and is associated with 1 phenotype.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000375703.3 | MSH5-004 | 2708 | 835aa | ENSP00000364855.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS34410 | O43196 Q5SSR2 | - | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000534153.4 | MSH5-203 | 3986 | 851aa | ENSP00000431693.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4DZX3 O43196 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000375755.3 | MSH5-001 | 3094 | 834aa | ENSP00000364908.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS4720 | B4DZX3 O43196 Q5SSR2 | NM_002441.4 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000375742.3 | MSH5-201 | 2823 | 851aa | ENSP00000364894.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4DZX3 O43196 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000375750.3 | MSH5-002 | 2775 | 834aa | ENSP00000364903.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS4720 | B4DZX3 O43196 Q5SSR2 | NM_172166.3 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000395853.1 | MSH5-006 | 2704 | 508aa | ENSP00000379194.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A2ABF0 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000375740.3 | MSH5-005 | 2669 | 822aa | ENSP00000364892.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS34409 | O43196 | NM_025259.5 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000431848.2 | MSH5-202 | 1879 | 533aa | ENSP00000416784.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4DZX3 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000450148.1 | MSH5-011 | 1000 | 333aa | ENSP00000394971.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A2ABE9 | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000425703.1 | MSH5-008 | 694 | 194aa | ENSP00000402842.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q5SSR2 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000429846.1 | MSH5-018 | 616 | 156aa | ENSP00000406849.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A2ABF1 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000423982.2 | MSH5-021 | 2706 | 637aa | ENSP00000406352.2 | Nonsense mediated decay | H7C2J4 Q5SSR2 | - | - | |
| ENST00000463144.1 | MSH5-010 | 2296 | 159aa | ENSP00000419648.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000484309.1 | MSH5-017 | 857 | 166aa | ENSP00000420232.1 | Nonsense mediated decay | H0YDS7 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000497269.1 | MSH5-012 | 764 | 43aa | ENSP00000419131.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000482280.1 | MSH5-019 | 944 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000468602.1 | MSH5-013 | 637 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000463094.1 | MSH5-009 | 796 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000468136.1 | MSH5-022 | 690 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000467319.1 | MSH5-014 | 688 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000494646.1 | MSH5-023 | 528 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000494458.1 | MSH5-016 | 520 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
