Description
SMG5 nonsense mediated mRNA decay factor [Source:HGNC Symbol;Acc:24644]
Gene Synonyms
EST1B, KIAA1089, LPTS-RP1, LPTSRP1, RP11-54H19.7, SMG-5
Location
Chromosome 1: 156,219,015-156,252,620 reverse strand.
GRCh37:CM000663.1
About this gene
This gene has 6 transcripts (splice variants) and 2 paralogues.
Transcripts
Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
---|---|---|---|---|---|---|---|---|---|
ENST00000361813.5 | SMG5-001 | 4559 | 1016aa | ENSP00000355261.5 | Protein coding | CCDS1137 | Q9UPR3 | NM_015327.2 | Ensembl Canonical, GENCODE basic, |
ENST00000368267.5 | SMG5-201 | 1274 | 374aa | ENSP00000357250.4 | Protein coding | Q5SZX1 | - | GENCODE basic, | |
ENST00000489907.2 | SMG5-008 | 535 | No protein | - | Processed transcript | - | - | - | |
ENST00000476954.1 | SMG5-005 | 1161 | No protein | - | Retained intron | - | - | - | |
ENST00000473643.1 | SMG5-004 | 541 | No protein | - | Retained intron | - | - | - | |
ENST00000468993.1 | SMG5-003 | 345 | No protein | - | Retained intron | - | - | - |