Description
lipocalin 10 [Source:HGNC Symbol;Acc:20892]
Location
Chromosome 9: 139,632,619-139,637,808 reverse strand.
GRCh37:CM000671.1
About this gene
This gene has 8 transcripts (splice variants).
Transcripts
Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
---|---|---|---|---|---|---|---|---|---|
ENST00000497771.1 | LCN10-001 | 723 | 200aa | ENSP00000418491.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS35182 | E9PRR3 Q6JVE6 | NM_001001712.2 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
ENST00000527229.1 | LCN10-006 | 615 | 164aa | ENSP00000431726.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PK15 E9PRR3 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
ENST00000474369.1 | LCN10-002 | 564 | 187aa | ENSP00000420564.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PRR3 Q6JVE6 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
ENST00000341040.7 | LCN10-003 | 1780 | 86aa | ENSP00000435948.1 | Nonsense mediated decay | E9PRR3 | - | - | |
ENST00000529013.1 | LCN10-010 | 570 | 37aa | ENSP00000431930.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
ENST00000532006.1 | LCN10-007 | 443 | 75aa | ENSP00000434410.1 | Nonsense mediated decay | E9PQQ7 | - | - | |
ENST00000406721.3 | LCN10-004 | 3262 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000494294.1 | LCN10-005 | 2505 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |