Description
smoothelin [Source:HGNC Symbol;Acc:11126]
Gene Synonyms
SMSMO
Location
Chromosome 22: 31,460,091-31,500,743 forward strand.
GRCh37:CM000684.1
About this gene
This gene has 21 transcripts (splice variants) and 13 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000358743.1 | SMTN-003 | 3198 | 940aa | ENSP00000351593.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS13887 | C9JGQ0 C9JP19 P53814 | NM_134270.2 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000333137.7 | SMTN-002 | 3295 | 915aa | ENSP00000329532.7 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS13888 | B3KTQ6 C9JGQ0 C9JP19 P53814 | NM_134269.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000347557.2 | SMTN-001 | 3130 | 917aa | ENSP00000328635.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS13886 | C9JGQ0 C9JP19 P53814 | NM_006932.4 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000404574.1 | SMTN-009 | 1735 | 438aa | ENSP00000383919.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B3KTQ6 B5MCI0 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000416786.1 | SMTN-018 | 823 | 98aa | ENSP00000409990.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JP19 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000455608.1 | SMTN-021 | 648 | 216aa | ENSP00000392329.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H7BZZ8 | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000440425.1 | SMTN-013 | 599 | 151aa | ENSP00000401341.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JBH9 C9JGQ0 C9JV14 C9JYU8 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000426927.1 | SMTN-015 | 574 | 141aa | ENSP00000399432.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JBH9 C9JGQ0 C9JV14 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000432777.1 | SMTN-011 | 567 | 91aa | ENSP00000398663.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JBH9 C9JGQ0 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000422839.1 | SMTN-012 | 566 | 37aa | ENSP00000390453.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JGQ0 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000438223.1 | SMTN-023 | 545 | 182aa | ENSP00000409925.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JGQ0 | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000431481.1 | SMTN-017 | 534 | 158aa | ENSP00000394637.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JQZ8 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000475548.1 | SMTN-019 | 598 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000482444.1 | SMTN-014 | 589 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000460658.1 | SMTN-006 | 5080 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000489337.1 | SMTN-004 | 3560 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000493335.1 | SMTN-007 | 2937 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000504335.1 | SMTN-024 | 2608 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000466272.1 | SMTN-020 | 576 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000497697.1 | SMTN-016 | 558 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000472911.1 | SMTN-022 | 543 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
