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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Paralogues
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PDDC1 ENSG00000177225

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Description

Parkinson disease 7 domain containing 1 [Source:HGNC Symbol;Acc:26616]

Gene Synonyms

FLJ34283

Location

Chromosome 11: 767,220-777,488 reverse strand.

GRCh37:CM000673.1

About this gene

This gene has 17 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000319863.8	PDDC1-003	4357	220aa	ENSP00000321691.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7713	B7Z1J9 B7ZKW4 Q8NB37	NM_182612.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000442059.2	PDDC1-201	1300	170aa	ENSP00000397890.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z1J9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000524550.1	PDDC1-014	995	184aa	ENSP00000431183.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7ZKW3 Q8NB37	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000397472.2	PDDC1-006	790	250aa	ENSP00000380612.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8NB37	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000526325.1	PDDC1-016	756	186aa	ENSP00000433322.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PLI5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000528309.1	PDDC1-012	510	162aa	ENSP00000437068.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YF25	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000526650.1	PDDC1-017	457	144aa	ENSP00000434839.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YE25	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000465313.2	PDDC1-010	446	87aa	ENSP00000436417.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000354286.4	PDDC1-001	3973	184aa	ENSP00000346239.4	Nonsense mediated decay		B7ZKW3 Q8NB37	-	-
ENST00000534603.1	PDDC1-005	863	120aa	ENSP00000436861.1	Nonsense mediated decay		E9PQD8	-	-
ENST00000529966.1	PDDC1-018	800	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000529362.1	PDDC1-007	578	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000532839.1	PDDC1-015	559	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000532320.1	PDDC1-004	1273	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000530209.1	PDDC1-013	600	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000528602.1	PDDC1-008	569	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000533960.1	PDDC1-009	299	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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