Description
lipoxygenase homology domains 1 [Source:HGNC Symbol;Acc:26521]
Gene Synonyms
DFNB77, FLJ32670, LH2D1
Location
Chromosome 18: 44,056,935-44,236,996 reverse strand.
GRCh37:CM000680.1
About this gene
This gene has 14 transcripts (splice variants) and is associated with 3 phenotypes.
Transcripts
Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
---|---|---|---|---|---|---|---|---|---|
ENST00000300591.6 | LOXHD1-002 | 3970 | 1114aa | ENSP00000300591.6 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS45861 | C9IYQ1 C9J269 Q8IVV2 | NM_001145472.2 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
ENST00000536736.1 | LOXHD1-203 | 6848 | 2211aa | ENSP00000444586.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9IYQ1 C9J269 F5GZB4 J3KRE7 | NM_144612.6 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
ENST00000441551.2 | LOXHD1-013 | 6226 | 2067aa | ENSP00000387621.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9IYQ1 C9J269 H7BZ41 J3QKX9 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
ENST00000398722.4 | LOXHD1-201 | 6054 | 1947aa | ENSP00000381707.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9IYQ1 C9J269 Q8IVV2 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
ENST00000582408.1 | LOXHD1-014 | 3755 | 1100aa | ENSP00000461964.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9IYQ1 C9J269 J3KRE7 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
ENST00000441893.2 | LOXHD1-202 | 3755 | 1144aa | ENSP00000409062.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9IYQ1 C9J269 F8WA52 J3KRE7 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
ENST00000579038.1 | LOXHD1-015 | 3632 | 1011aa | ENSP00000463285.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J269 J3QKX9 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
ENST00000398686.4 | LOXHD1-008 | 1958 | 512aa | ENSP00000381676.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS45862 | C9J269 Q8IVV2 | NM_001145473.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
ENST00000398705.2 | LOXHD1-007 | 1824 | 457aa | ENSP00000381692.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS54184 | C9J269 Q8IVV2 | NM_001173129.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
ENST00000414184.1 | LOXHD1-010 | 675 | 180aa | ENSP00000392440.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J269 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
ENST00000452425.1 | LOXHD1-009 | 560 | 57aa | ENSP00000414278.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JMG7 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
ENST00000419859.1 | LOXHD1-005 | 556 | 23aa | ENSP00000412568.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9IYQ1 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
ENST00000536111.1 | LOXHD1-006 | 1358 | 306aa | ENSP00000440060.1 | Nonsense mediated decay | F5GXP0 | - | - | |
ENST00000335730.2 | LOXHD1-001 | 4775 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |