Description
protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 [Source:HGNC Symbol;Acc:9245]
Gene Synonyms
LIP.1, LIP1, LIPRIN
Location
Chromosome 11: 70,116,806-70,230,509 forward strand.
GRCh37:CM000673.1
About this gene
This gene has 24 transcripts (splice variants) and 6 paralogues.
Transcripts
Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
---|---|---|---|---|---|---|---|---|---|
ENST00000253925.7 | PPFIA1-001 | 5234 | 1202aa | ENSP00000253925.7 | Protein coding | CCDS31627 | B3KVS8 E9PID5 E9PPF6 Q13136 | NM_003626.3 | Ensembl Canonical, GENCODE basic, |
ENST00000389547.3 | PPFIA1-002 | 4133 | 1185aa | ENSP00000374198.3 | Protein coding | CCDS31628 | E9PID5 E9PPF6 Q13136 | NM_177423.2 | GENCODE basic, |
ENST00000528750.1 | PPFIA1-018 | 1168 | 389aa | ENSP00000434445.1 | Protein coding | - | - | CDS 5' and 3' incomplete, | |
ENST00000528853.1 | PPFIA1-023 | 745 | 98aa | ENSP00000434692.1 | Protein coding | - | - | CDS 5' incomplete, | |
ENST00000530798.1 | PPFIA1-013 | 710 | 237aa | ENSP00000433114.1 | Protein coding | - | - | CDS 5' and 3' incomplete, | |
ENST00000530746.1 | PPFIA1-008 | 575 | 158aa | ENSP00000432722.1 | Protein coding | E9PID5 E9PPF6 | - | CDS 3' incomplete, | |
ENST00000532024.1 | PPFIA1-009 | 563 | 99aa | ENSP00000432065.1 | Protein coding | E9PID5 | - | CDS 3' incomplete, | |
ENST00000532504.1 | PPFIA1-003 | 5159 | 583aa | ENSP00000433619.1 | Nonsense mediated decay | E9PID5 E9PJZ7 E9PPF6 | - | - | |
ENST00000526262.1 | PPFIA1-004 | 4537 | 387aa | ENSP00000435752.1 | Nonsense mediated decay | - | - | CDS 5' incomplete, | |
ENST00000530294.1 | PPFIA1-017 | 977 | 55aa | ENSP00000431828.1 | Nonsense mediated decay | - | - | CDS 5' incomplete, | |
ENST00000530390.1 | PPFIA1-021 | 879 | 46aa | ENSP00000435978.1 | Nonsense mediated decay | H0YEK0 | - | CDS 5' incomplete, | |
ENST00000526347.1 | PPFIA1-016 | 862 | 61aa | ENSP00000431692.1 | Nonsense mediated decay | - | - | CDS 5' incomplete, | |
ENST00000526369.1 | PPFIA1-014 | 564 | 97aa | ENSP00000437024.1 | Nonsense mediated decay | - | - | CDS 5' incomplete, | |
ENST00000533894.1 | PPFIA1-019 | 553 | 33aa | ENSP00000432913.1 | Nonsense mediated decay | - | - | CDS 5' incomplete, | |
ENST00000525922.1 | PPFIA1-025 | 358 | 48aa | ENSP00000436234.1 | Nonsense mediated decay | - | - | CDS 5' incomplete, | |
ENST00000530548.1 | PPFIA1-006 | 3774 | No protein | - | Processed transcript | - | - | - | |
ENST00000532443.1 | PPFIA1-012 | 587 | No protein | - | Processed transcript | - | - | - | |
ENST00000526074.1 | PPFIA1-020 | 573 | No protein | - | Processed transcript | - | - | - | |
ENST00000528284.1 | PPFIA1-015 | 568 | No protein | - | Processed transcript | - | - | - | |
ENST00000530932.1 | PPFIA1-010 | 536 | No protein | - | Processed transcript | - | - | - | |
ENST00000531657.1 | PPFIA1-007 | 3036 | No protein | - | Retained intron | - | - | - | |
ENST00000527612.1 | PPFIA1-022 | 598 | No protein | - | Retained intron | - | - | - | |
ENST00000532793.1 | PPFIA1-024 | 550 | No protein | - | Retained intron | - | - | - | |
ENST00000525530.1 | PPFIA1-011 | 514 | No protein | - | Retained intron | - | - | - |