Description
cadherin-related family member 3 [Source:HGNC Symbol;Acc:26308]
Gene Synonyms
CDH28, FLJ23834, FLJ44366
Location
Chromosome 7: 105,517,242-105,676,877 forward strand.
GRCh37:CM000669.1
About this gene
This gene has 17 transcripts (splice variants) and 1 paralogue.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000317716.9 | CDHR3-004 | 3813 | 885aa | ENSP00000325954.9 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS47684 | E7EQG5 Q6ZTQ4 | NM_152750.4 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000542731.1 | CDHR3-203 | 6500 | 885aa | ENSP00000439766.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H0Z2 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000343407.5 | CDHR3-201 | 5856 | 279aa | ENSP00000341510.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JNJ3 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000478080.1 | CDHR3-006 | 2633 | 797aa | ENSP00000417771.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E7EQG5 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000466045.1 | CDHR3-005 | 2358 | 318aa | ENSP00000419017.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H7C555 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000541203.1 | CDHR3-202 | 971 | 149aa | ENSP00000443733.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PEI5 F8WF00 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000468477.1 | CDHR3-011 | 482 | 161aa | ENSP00000418958.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000496633.1 | CDHR3-007 | 949 | 149aa | ENSP00000417198.1 | Nonsense mediated decay | E9PEI5 F8WF00 | - | - | |
| ENST00000488386.1 | CDHR3-009 | 540 | 61aa | ENSP00000419593.1 | Nonsense mediated decay | F8WF00 | - | - | |
| ENST00000470188.1 | CDHR3-002 | 2199 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000474330.1 | CDHR3-001 | 1603 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000472116.1 | CDHR3-003 | 993 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000487084.1 | CDHR3-008 | 834 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000461766.1 | CDHR3-010 | 536 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000468143.1 | CDHR3-012 | 575 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000471910.1 | CDHR3-013 | 392 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000466351.1 | CDHR3-014 | 362 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
