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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SCAF1 ENSG00000126461

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Description

SR-related CTD-associated factor 1 [Source:HGNC Symbol;Acc:30403]

Gene Synonyms

FLJ00034, SFRS19, SR-A1, SRA1

Location

Chromosome 19: 50,145,382-50,161,899 forward strand.

GRCh37:CM000681.1

About this gene

This gene has 4 transcripts (splice variants) and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000360565.3	SCAF1-001	4306	1312aa	ENSP00000353769.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33074	M0R2L3 M0R3G4 Q9H7N4	NM_021228.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000598359.1	SCAF1-005	662	203aa	ENSP00000473210.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0R2L3 M0R3G4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000601038.1	SCAF1-003	491	98aa	ENSP00000472649.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0R2L3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000595242.1	SCAF1-004	463	119aa	ENSP00000472276.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0R232	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

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Summary

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