Gene: SOX6 ENSG00000110693

Description

SRY (sex determining region Y)-box 6 [Source:HGNC Symbol;Acc:16421]

Gene Synonyms

HSSOX6, SOXD

Location

Chromosome 11: 15,987,995-16,761,138 reverse strand.

GRCh37:CM000673.1

About this gene

This gene has 18 transcripts (splice variants), 19 paralogues and is associated with 2 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000396356.3	SOX6-202	8865	808aa	ENSP00000379644.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7821	E9PN02 E9PQ67 E9PQL4 P35712	NM_033326.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000352083.6	SOX6-201	8925	828aa	ENSP00000339876.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PN02 E9PQ67 E9PQL4 P35712	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000316399.6	SOX6-001	8808	808aa	ENSP00000324948.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7821	E9PN02 E9PQ67 E9PQL4 P35712	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000528252.1	SOX6-002	2707	801aa	ENSP00000432134.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53604	E9PN02 E9PQ67 E9PQL4 P35712	NM_001145811.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000527619.1	SOX6-003	2699	804aa	ENSP00000434455.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53605	E9PN02 E9PQ67 E9PQL4 P35712	NM_017508.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000528429.1	SOX6-012	2656	828aa	ENSP00000433233.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PN02 E9PQ67 E9PQL4 P35712	NM_001145819.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000533411.1	SOX6-009	586	159aa	ENSP00000436170.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PN02 E9PQ67 E9PQL4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000529469.1	SOX6-008	549	79aa	ENSP00000432596.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PQ67	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000526673.1	SOX6-010	534	139aa	ENSP00000434892.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PN02 E9PQ67	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000530378.1	SOX6-011	1818	159aa	ENSP00000432577.1	Nonsense mediated decay		E9PN02 E9PQ67 E9PQ78	-	-
ENST00000533658.1	SOX6-006	1198	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000524520.1	SOX6-015	709	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000525835.1	SOX6-017	660	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000527840.1	SOX6-007	574	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000525259.1	SOX6-016	574	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000524650.1	SOX6-013	534	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000531297.1	SOX6-014	429	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000533870.1	SOX6-005	7224	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Gene: SOX6 ENSG00000110693

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Gene: SOX6 ENSG00000110693

Summary