Description
RNA binding protein, fox-1 homolog (C. elegans) 2 [Source:HGNC Symbol;Acc:9906]
Gene Synonyms
FOX-2, FOX2, Fox-2, HNRBP2, HRNBP2, RBM9, RTA, dJ106I20.3, fxh
Location
Chromosome 22: 36,134,783-36,424,473 reverse strand.
GRCh37:CM000684.1
About this gene
This gene has 14 transcripts (splice variants) and 2 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000438146.2 | RBFOX2-005 | 1356 | 451aa | ENSP00000413035.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS43013 | O43251 | NM_001082579.1 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000405409.2 | RBFOX2-001 | 6932 | 367aa | ENSP00000384944.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS13921 | O43251 | NM_014309.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000449924.2 | RBFOX2-003 | 1935 | 380aa | ENSP00000391670.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS46700 | O43251 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000414461.2 | RBFOX2-010 | 1706 | 370aa | ENSP00000407855.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS46699 | O43251 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000262829.7 | RBFOX2-002 | 1538 | 358aa | ENSP00000262829.7 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | O43251 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000359369.4 | RBFOX2-006 | 1409 | 370aa | ENSP00000352328.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B0QYY4 S4R469 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000397303.2 | RBFOX2-009 | 1354 | 357aa | ENSP00000380470.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B0QYV1 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000416721.2 | RBFOX2-008 | 1254 | 376aa | ENSP00000405651.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS46701 | O43251 S4R469 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000473487.2 | RBFOX2-014 | 789 | 234aa | ENSP00000475142.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | S4R469 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000397305.3 | RBFOX2-013 | 759 | 128aa | ENSP00000380472.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B0QYY6 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000495377.2 | RBFOX2-004 | 733 | 230aa | ENSP00000474464.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000408983.2 | RBFOX2-012 | 663 | 200aa | ENSP00000386177.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B0QYY7 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000463509.1 | RBFOX2-011 | 2396 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000491982.1 | RBFOX2-007 | 1004 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
