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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: COL19A1 ENSG00000082293

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Description

collagen, type XIX, alpha 1 [Source:HGNC Symbol;Acc:2196]

Gene Synonyms

COL9A1L, D6S228E

Location

Chromosome 6: 70,576,463-70,919,679 forward strand.

GRCh37:CM000668.1

About this gene

This gene has 6 transcripts (splice variants) and 9 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000322773.4	COL19A1-001	6232	1142aa	ENSP00000316030.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4970	Q14993	NM_001858.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000393344.1	COL19A1-002	5023	764aa	ENSP00000377013.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000455415.1	COL19A1-003	256	36aa	ENSP00000416556.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5JVU1	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000476656.1	COL19A1-005	1515	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000483745.1	COL19A1-006	550	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000478620.1	COL19A1-004	349	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

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Summary

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