Description
TNF receptor-associated factor 4 [Source:HGNC Symbol;Acc:12034]
Gene Synonyms
CART1, MLN62, RNF83
Location
Chromosome 17: 27,071,002-27,077,974 forward strand.
GRCh37:CM000679.1
About this gene
This gene has 16 transcripts (splice variants) and 5 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000262395.5 | TRAF4-001 | 2921 | 470aa | ENSP00000262395.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS11243 | K7EJG7 K7ER49 Q9BUZ4 | NM_004295.3 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000444415.3 | TRAF4-009 | 1456 | 437aa | ENSP00000438154.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F6SA91 K7EJG7 K7ER49 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000584944.1 | TRAF4-016 | 825 | 48aa | ENSP00000465164.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7EJG7 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000262396.6 | TRAF4-010 | 683 | 195aa | ENSP00000262396.6 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9BUZ4 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000422344.1 | TRAF4-002 | 631 | 182aa | ENSP00000415789.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JJ10 K7EJG7 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000473421.1 | TRAF4-004 | 585 | 90aa | ENSP00000468107.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7EJG7 K7ER49 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000586813.1 | TRAF4-020 | 789 | 53aa | ENSP00000466306.1 | Nonsense mediated decay | J3QR87 K7EM06 | - | - | |
| ENST00000478021.1 | TRAF4-005 | 718 | 49aa | ENSP00000464097.1 | Nonsense mediated decay | J3QR87 | - | - | |
| ENST00000454852.2 | TRAF4-019 | 672 | 112aa | ENSP00000396602.2 | Nonsense mediated decay | J9JIG0 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000475329.1 | TRAF4-003 | 544 | 92aa | ENSP00000464583.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000469529.2 | TRAF4-007 | 788 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000461195.1 | TRAF4-008 | 787 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000498540.2 | TRAF4-014 | 748 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000394925.5 | TRAF4-006 | 702 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000578917.1 | TRAF4-017 | 484 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000580073.1 | TRAF4-018 | 449 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
