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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: COL6A6 ENSG00000206384

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Description

collagen, type VI, alpha 6 [Source:HGNC Symbol;Acc:27023]

Location

Chromosome 3: 130,279,178-130,396,999 forward strand.

GRCh37:CM000665.1

About this gene

This gene has 4 transcripts (splice variants) and 9 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000358511.6	COL6A6-001	9581	2263aa	ENSP00000351310.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46911	A6NMZ7	NM_001102608.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000453409.2	COL6A6-201	8458	2263aa	ENSP00000399236.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8W6Y7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000511332.1	COL6A6-003	778	259aa	ENSP00000422921.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000506143.1	COL6A6-002	4353	298aa	ENSP00000426006.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

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Summary

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