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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Paralogues
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PTAR1 ENSG00000188647

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Description

protein prenyltransferase alpha subunit repeat containing 1 [Source:HGNC Symbol;Acc:30449]

Location

Chromosome 9: 72,324,438-72,374,875 reverse strand.

GRCh37:CM000671.1

About this gene

This gene has 6 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000340434.4	PTAR1-002	1417	402aa	ENSP00000344299.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47978	Q7Z6K3	NM_001099666.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000377200.5	PTAR1-001	9876	350aa	ENSP00000366405.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GXY1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000472967.2	PTAR1-004	1689	29aa	ENSP00000440164.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GXY1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000415701.2	PTAR1-005	826	168aa	ENSP00000405943.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000474925.2	PTAR1-006	616	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000467511.1	PTAR1-003	530	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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