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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: HPCAL1 ENSG00000115756

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Description

hippocalcin-like 1 [Source:HGNC Symbol;Acc:5145]

Gene Synonyms

BDR1, HLP2, VILIP-3

Location

Chromosome 2: 10,443,015-10,567,743 forward strand.

GRCh37:CM000664.1

About this gene

This gene has 5 transcripts (splice variants) and 13 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000381765.3	HPCAL1-002	1904	193aa	ENSP00000371184.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1671	C9JW46 O75544 P37235 Q6FGY1	NM_134421.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000307845.3	HPCAL1-001	1751	193aa	ENSP00000310749.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1671	C9JW46 O75544 P37235 Q6FGY1	NM_002149.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000422133.1	HPCAL1-005	587	103aa	ENSP00000388856.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000423674.1	HPCAL1-004	586	30aa	ENSP00000413689.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JW46	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000419810.2	HPCAL1-003	4781	175aa	ENSP00000416359.2	Nonsense mediated decay		C9JW46 E9PC71	-	-

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Summary

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