Transcript: ENST00000267868.3 RAD51-001

Description

RAD51 recombinase [Source:HGNC Symbol;Acc:9817]

Gene Synonyms

BRCC5, HRAD51, HsRad51, HsT16930, MRMV2, RAD51A, RECA

Location

Chromosome 15: 40,987,358-41,024,354 forward strand.

About this transcript

This transcript has 10 exons, is annotated with 14 domains and features, is associated with 18284 variant alleles and maps to 508 oligo probes.

Gene

This transcript is a product of gene ENSG00000051180.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000382643.3	RAD51-009	1588	340aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53931	Q06609 Q9NZG9	NM_001164269.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000267868.3	RAD51-001	2266	339aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10062	E9PNT5 Q06609 Q9NZG9	NM_002875.4	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000423169.2	RAD51-002	1611	280aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53932	E9PNT5 Q06609 Q9NZG9	NM_001164270.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000532743.1	RAD51-008	1515	340aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53931	Q06609 Q9NZG9	NM_133487.3	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000557850.1	RAD51-003	1397	242aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q06609 Q9NZG9	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000526763.1	RAD51-006	625	75aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9NZG9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000527860.1	RAD51-007	566	172aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PNT5 Q9NZG9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000525066.1	RAD51-004	1545	151aa	Nonsense mediated decay		E9PJ30 Q9NZG9	-	-
ENST00000531277.2	RAD51-010	658	100aa	Nonsense mediated decay		E9PI54 Q9NZG9	-	-
ENST00000533741.1	RAD51-013	425	65aa	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000530766.1	RAD51-011	434	No protein	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Loading component

Statistics

Exons: 10, Coding exons: 9, Transcript length: 2,266 bps, Translation length: 339 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q06609

CCDS

This transcript is a member of the Human CCDS set: CCDS10062

Version

ENST00000267868.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000252358 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Personal Data

Favourite species

All species

Recent locations

Transcript: ENST00000267868.3 RAD51-001

Summary