Description
LETM1 domain containing 1 [Source:HGNC Symbol;Acc:24241]
Gene Synonyms
1110019O13Rik, HCCR-1, HCCR-2, HCCR1, HCRR-2
Location
Chromosome 12: 51,441,745-51,451,870 forward strand.
About this transcript
This transcript has 8 exons, is annotated with 4 domains and features, is associated with 4656 variant alleles and maps to 344 oligo probes.
Gene
This transcript is a product of gene ENSG00000050426.11 Show transcript tableHide transcript table
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000418425.2 | LETMD1-006 | 2123 | 373aa | ENSP00000389903.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS58231 | F8VR33 F8VR35 Q6P1Q0 | NM_001243689.1 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000262055.4 | LETMD1-001 | 2112 | 360aa | ENSP00000262055.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS8806 | F8VR33 F8VR35 Q6P1Q0 | NM_015416.4 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000380123.2 | LETMD1-201 | 1901 | 99aa | ENSP00000369466.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VR35 Q6P1Q0 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000552739.1 | LETMD1-012 | 1713 | 243aa | ENSP00000450333.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VP71 F8VR33 F8VR35 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000547008.1 | LETMD1-008 | 1665 | 236aa | ENSP00000447419.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VR35 F8VTR1 F8W1Z2 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000550929.1 | LETMD1-003 | 1389 | 304aa | ENSP00000450163.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VR33 Q6P1Q0 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000551477.1 | LETMD1-015 | 1186 | 290aa | ENSP00000446862.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VZA2 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000549340.1 | LETMD1-019 | 818 | 260aa | ENSP00000449896.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VR35 F8VVQ3 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000553043.1 | LETMD1-038 | 727 | 98aa | ENSP00000446967.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000551931.1 | LETMD1-037 | 705 | 144aa | ENSP00000450251.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000547256.1 | LETMD1-036 | 618 | 110aa | ENSP00000446551.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000547660.1 | LETMD1-027 | 601 | 109aa | ENSP00000450391.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VR33 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000548251.1 | LETMD1-025 | 582 | 184aa | ENSP00000447166.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VR35 F8W0R0 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000548209.1 | LETMD1-024 | 568 | 179aa | ENSP00000450275.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VPY5 F8VR35 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000550814.1 | LETMD1-026 | 565 | 158aa | ENSP00000448222.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VS60 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000550442.1 | LETMD1-034 | 469 | 144aa | ENSP00000448110.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VR35 F8VTR1 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000548401.1 | LETMD1-028 | 433 | 135aa | ENSP00000450082.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VQE7 F8VR35 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000547318.1 | LETMD1-002 | 2001 | 138aa | ENSP00000448442.1 | Nonsense mediated decay | F8VR35 F8WCD9 | - | - | |
| ENST00000547555.1 | LETMD1-004 | 1658 | 41aa | ENSP00000450390.1 | Nonsense mediated decay | F8VR35 | - | - | |
| ENST00000380135.3 | LETMD1-010 | 1566 | 147aa | ENSP00000369478.3 | Nonsense mediated decay | F8VR35 F8W6J0 | - | - | |
| ENST00000550100.1 | LETMD1-009 | 1480 | 155aa | ENSP00000447047.1 | Nonsense mediated decay | F8VR35 Q6P1Q0 | - | - | |
| ENST00000549686.1 | LETMD1-029 | 563 | 43aa | ENSP00000447420.1 | Nonsense mediated decay | F8VR35 F8W1U1 | - | - | |
| ENST00000550755.1 | LETMD1-021 | 552 | 43aa | ENSP00000449681.1 | Nonsense mediated decay | F8VUZ8 | - | - | |
| ENST00000551261.1 | LETMD1-022 | 521 | 99aa | ENSP00000448800.1 | Nonsense mediated decay | F8VR35 F8VUZ8 F8VXQ4 | - | - | |
| ENST00000548516.1 | LETMD1-032 | 850 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000552430.1 | LETMD1-016 | 608 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000550446.1 | LETMD1-033 | 562 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000553175.1 | LETMD1-017 | 555 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000549395.1 | LETMD1-039 | 475 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000547029.1 | LETMD1-023 | 455 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000547877.1 | LETMD1-011 | 2020 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000552645.1 | LETMD1-013 | 1623 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000550715.1 | LETMD1-005 | 907 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000546814.1 | LETMD1-030 | 894 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000550274.1 | LETMD1-035 | 809 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000552433.1 | LETMD1-031 | 727 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000546992.1 | LETMD1-020 | 578 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000548390.1 | LETMD1-018 | 549 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |