Human (GRCh37.p13)
Description

lysine (K)-specific demethylase 5A [Source:HGNC Symbol;Acc:9886]

Gene Synonyms

JARID1A, RBBP-2, RBBP2, RBP2

Location
About this transcript

This transcript has 28 exons, is annotated with 48 domains and features, is associated with 54002 variant alleles and maps to 1247 oligo probes.

Gene
Show/hide columns (1 hidden)
  • Transcript ID
  • Name
  • bp
  • Protein
  • Translation ID
  • Biotype
  • CCDS
  • UniProt Match
  • RefSeq
  • Flags
Transcript IDNamebpProteinBiotypeCCDSUniProt MatchRefSeqFlags
ENST00000399788.2KDM5A-001107631690aa
 
Protein coding
CCDS41736P29375 NM_001042603.1Ensembl CanonicalGENCODE Basic
ENST00000382815.4KDM5A-20152741636aa
 
Protein coding
F5H1F7 -GENCODE Basic
ENST00000544760.1KDM5A-0122338715aa
 
Protein coding
E7EV89 -CDS 3' incomplete
ENST00000543507.1KDM5A-009575131aa
 
Protein coding
F5GZR8 -CDS 3' incomplete
ENST00000536014.1KDM5A-010558122aa
 
Protein coding
F5H322 -CDS 3' incomplete
ENST00000535014.1KDM5A-011551126aa
 
Protein coding
F5GZ99 -CDS 3' incomplete
ENST00000540838.1KDM5A-003456No protein
 
Processed transcript
---
ENST00000544777.1KDM5A-008670No protein
 
Retained intron
---
ENST00000540168.1KDM5A-007523No protein
 
Retained intron
---
ENST00000540156.1KDM5A-004516No protein
 
Retained intron
---
ENST00000535269.1KDM5A-005401No protein
 
Retained intron
---
ENST00000541335.1KDM5A-006378No protein
 
Retained intron
---
Statistics

Exons: 28, Coding exons: 28, Transcript length: 10,763 bps, Translation length: 1,690 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P29375

CCDS

This transcript is a member of the Human CCDS set: CCDS41736

Version

ENST00000399788.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:
OTTHUMT00000397812 (version 1)
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.