Human (GRCh37.p13)
Description

polycystic kidney disease 2-like 1 [Source:HGNC Symbol;Acc:9011]

Gene Synonyms

PCL, PKD2L, PKDL, TRPP3

About this transcript

This transcript has 16 exons, is annotated with 29 domains and features, is associated with 18877 variant alleles and maps to 556 oligo probes.

Show/hide columns (1 hidden)
  • Transcript ID
  • Name
  • bp
  • Protein
  • Translation ID
  • Biotype
  • CCDS
  • UniProt Match
  • RefSeq
  • Flags
Transcript IDNamebpProteinBiotypeCCDSUniProt MatchRefSeqFlags
ENST00000318222.3PKD2L1-0013043805aa
 
Protein coding
CCDS7492Q9P0L9 NM_016112.2Ensembl CanonicalGENCODE Basic
ENST00000353274.3PKD2L1-2022966760aa
 
Protein coding
Q9P0L9 -GENCODE Basic
ENST00000338519.3PKD2L1-2012826730aa
 
Protein coding
Q9P0L9 -GENCODE Basic
ENST00000465680.2PKD2L1-00242362aa
 
Protein coding
--CDS 5' incomplete
ENST00000528248.1PKD2L1-004227739aa
 
Nonsense mediated decay
--CDS 5' incomplete
ENST00000532547.1PKD2L1-00355471aa
 
Nonsense mediated decay
E9PRD1 --
Statistics

Exons: 16, Coding exons: 16, Transcript length: 3,043 bps, Translation length: 805 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9P0L9

CCDS

This transcript is a member of the Human CCDS set: CCDS7492

Version

ENST00000318222.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Stop codons

This transcript has a variant, rs7904983, that causes a stop codon to be gained in at least 10% of HapMap or 1000 Genome population(s) CSHL-HAPMAP:HAPMAP-MKK, CSHL-HAPMAP:HAPMAP-ASW, CSHL-HAPMAP:HapMap-YRI, ESP6500:African_American, CSHL-HAPMAP:HAPMAP-LWK.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:
OTTHUMT00000049863 (version 2)
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.