Transcript: ENST00000599201.1 HCFC1-202

Description

host cell factor C1 (VP16-accessory protein) [Source:HGNC Symbol;Acc:4839]

Gene Synonyms

CFF, HCF-1, HCF1, HFC1, MGC70925, MRX3, VCAF

Location

Chromosome HG1497_PATCH: 153,116,031-153,139,836 reverse strand.

About this transcript

This transcript has 27 exons, is annotated with 40 domains and features, is associated with 8683 variant alleles and maps to 824 oligo probes.

Gene

This transcript is a product of gene ENSG00000268768.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	RefSeq	Flags
ENST00000597506.1	HCFC1-003	8375	2080aa	ENSP00000472568.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6NEM2 Q05C05	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000596798.1	HCFC1-001	8869	2035aa	ENSP00000470486.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P51610 Q05C05	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000599201.1	HCFC1-202	8213	1966aa	ENSP00000470791.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P51610	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000594343.1	HCFC1-004	3624	611aa	ENSP00000472054.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000598701.1	HCFC1-002	379	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	-

Summary

Statistics

Exons: 27, Coding exons: 27, Transcript length: 8,213 bps, Translation length: 1,966 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P51610

Version

ENST00000599201.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild and projected to the alternate locus via a mapping from the primary assembly.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000599201.1 HCFC1-202

Summary