Transcript: ENST00000422549.1 AMY1A-003

Description

amylase, alpha 1A (salivary) [Source:HGNC Symbol;Acc:474]

Gene Synonyms

AMY1

Location

About this transcript

This transcript has 3 exons, is annotated with 5 domains and features, is associated with 5 variant alleles and maps to 426 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000370083.4	AMY1A-001	1787	511aa	ENSP00000359100.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS30782	P04745 Q5T084 Q5T085	NM_004038.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000430659.1	AMY1A-002	1363	226aa	ENSP00000399836.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T084 Q5T085	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000422549.1	AMY1A-003	403	105aa	ENSP00000408386.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T084	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000494409.1	AMY1A-005	522	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000461518.1	AMY1A-004	747	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 403 bps, Translation length: 105 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000422549.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000030306 (version 5)