Transcript: ENST00000413817.3 DENND6B-001

Description

DENN/MADD domain containing 6B [Source:HGNC Symbol;Acc:32690]

Gene Synonyms

AFI1B, FAM116B, MGC33692

Location

About this transcript

This transcript has 20 exons, is annotated with 6 domains and features, is associated with 10156 variant alleles and maps to 747 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000413817.3	DENND6B-001	4939	585aa	ENSP00000391524.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46732	Q8NEG7	NM_001001794.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000433760.1	DENND6B-004	920	298aa	ENSP00000414072.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A6X8I4 H0Y7N0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000495607.1	DENND6B-002	2450	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000471942.2	DENND6B-005	990	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000460087.1	DENND6B-003	529	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 20, Coding exons: 20, Transcript length: 4,939 bps, Translation length: 585 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8NEG7

CCDS

This transcript is a member of the Human CCDS set: CCDS46732

Version

ENST00000413817.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000316845 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.