Transcript: ENST00000512805.1 GNB2L1-001

Description

guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1 [Source:HGNC Symbol;Acc:4399]

Gene Synonyms

Gnb2-rs1, H12.3, HLC-7, PIG21, RACK1, U95, U96A

Location

Chromosome 5: 180,663,937-180,671,209 reverse strand.

About this transcript

This transcript has 8 exons, is annotated with 33 domains and features, is associated with 4442 variant alleles and maps to 441 oligo probes.

Gene

This transcript is a product of gene ENSG00000204628.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000502844.1	GNB2L1-017	1460	236aa	ENSP00000422029.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6R9Z1 D6RFX4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000512805.1	GNB2L1-001	1403	317aa	ENSP00000426909.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34324	D6RF23 D6RFX4 E9KL35 P63244	NM_006098.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000510199.1	GNB2L1-012	1100	300aa	ENSP00000423569.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6R9L0 D6RFX4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000512968.1	GNB2L1-021	1058	321aa	ENSP00000425008.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6REE5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000456394.2	GNB2L1-201	1016	153aa	ENSP00000394470.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PD14	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000504128.1	GNB2L1-010	990	247aa	ENSP00000427677.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000376817.4	GNB2L1-035	965	273aa	ENSP00000366013.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RF23 J3KPE3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000511900.1	GNB2L1-036	922	269aa	ENSP00000422768.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RAC2 D6RF23	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000507756.1	GNB2L1-024	889	274aa	ENSP00000422316.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000509148.1	GNB2L1-025	888	83aa	ENSP00000424654.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000511566.1	GNB2L1-034	825	233aa	ENSP00000426101.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RHH4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000514455.1	GNB2L1-026	791	101aa	ENSP00000426708.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RF23	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000513027.1	GNB2L1-015	697	197aa	ENSP00000421356.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RFZ9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000507000.1	GNB2L1-011	685	194aa	ENSP00000421416.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RFX4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000502905.1	GNB2L1-032	643	198aa	ENSP00000426960.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RF23	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000503081.1	GNB2L1-018	587	160aa	ENSP00000424237.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RBD0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000509535.1	GNB2L1-031	456	138aa	ENSP00000421838.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000504726.1	GNB2L1-037	388	86aa	ENSP00000426046.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RHJ5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000508682.1	GNB2L1-022	1208	147aa	ENSP00000424760.1	Nonsense mediated decay		D6RAU2	-	-
ENST00000511473.1	GNB2L1-006	1150	39aa	ENSP00000420936.1	Nonsense mediated decay		D6RDI0	-	-
ENST00000504325.1	GNB2L1-007	1098	116aa	ENSP00000422198.1	Nonsense mediated decay		D6R909	-	-
ENST00000503494.1	GNB2L1-029	843	153aa	ENSP00000426111.1	Nonsense mediated decay		E9PD14	-	-
ENST00000506312.1	GNB2L1-016	559	71aa	ENSP00000426270.1	Nonsense mediated decay		D6RGK8	-	-
ENST00000505461.1	GNB2L1-002	1005	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000514318.1	GNB2L1-013	581	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000503170.1	GNB2L1-014	461	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000513060.1	GNB2L1-008	1651	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000514183.1	GNB2L1-009	1439	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000502548.1	GNB2L1-003	1090	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000515417.1	GNB2L1-030	873	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000502890.1	GNB2L1-028	705	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000507261.1	GNB2L1-020	590	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000508963.1	GNB2L1-019	581	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000508044.1	GNB2L1-027	554	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000507273.1	GNB2L1-023	358	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 1,403 bps, Translation length: 317 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P63244

CCDS

This transcript is a member of the Human CCDS set: CCDS34324

Version

ENST00000512805.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000372943 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000512805.1 GNB2L1-001

Summary